Research Article

Research Article

Lina Shalaby, Palak Tank, Ethan Wong, Dennis Xie
Deleting Two-thirds of the C-terminus Alpha Domain Region in Autotransporter Antigen 43 is Associated with Increased Aggregation and Biofilm Formation in DH5α Escherichia coli
August 28, 2024
John Goh, David Tan, Cayden Yu, Ali Zaidi
Engineering an OmpT Cleavage Site in the BrkA Passenger Domain to Explore the Role of the Conserved Autochaperone Region
August 28, 2024
Alma Garcia, Vincent Hsiung, Lina Shalaby, Gurpreet Sidhu, Kishor Sivanesan
Effects of a Resistant Starch Diet on Mouse Gut Microbiome Inadequately Translates to Findings in a Human Model
August 28, 2024
Madeleine Dunsmore, Olivia Kwon, Emily Moffat
Steps Towards Unraveling the Driving Force of BrkA Passenger Domain Translocation: The Role of Passenger Domain Length in Secretion Efficiency
August 28, 2024
Jason Bie, Nidhin Biju, Shini Chen, Haohua Li, Sina Safaeian
Smoking Traditional Cigarettes and Vaping May Not Affect the Diversity Metrics of the Oral Microbiota but Significantly and Distinctively Alters the Taxonomic Composition Relative to Non-Smokers
August 28, 2024
Alec Jessen, Dana Lao, Faith Liu, Annie Tsoromocos, Erica Won
Anemia May Mask the Effects that Stunting has on the Dysbiosis of the Infant Gut Microbiota
August 28, 2024
Arshia Tavangar, Cynthia Huang, Earl Joshua Ubalde, Kris Chen
Breast Milk Mitigates Microbial Differences Caused by Varying Modes of Infant Delivery Despite the C-section Microbiome Displaying an Increased Resistance to Change Over a Naturally Delivered Microbiome
August 28, 2024
Dana Lao, Faith Liu, Ava Tiefenbach, Nicholas Viegas
Developing a BrkA-based Protein Expression System in Escherichia coli Using the Mini-Tn7 Vector System
August 28, 2024
Ives Chau, Jason Bie, Rae Xu, Jordan Si
Evaluating the Role of the Fkpa Periplasmic Chaperone on the Secretion of the BrkA Autotransporter in Escherichia coli Strain K-12
August 28, 2024
Cynthia Chung, Hannah Hauch, Nicole Howes, Ellie Kim, Negar Zaghi
Soil Compaction Exacerbates the Impact of Organic Matter Removal During Timber Harvesting
August 28, 2024
Max Bremner, Ekaterina Galysheva, Alex Kwong, Josh Zhang
Steps Towards Investigating the Role of the Putative-Autochaperone Domain in Ag43 Passenger Folding In Vitro
August 28, 2024
Alix Najera Mazariegos, Keegan McDonald, Max Tepes, Sarah Zhang
Morphological and functional characterization of the C-terminal two-thirds of the autotransporter Ag43 alpha domain via site-directed mutagenesis in Escherichia coli DH5α
August 28, 2024
Melissa Lagace, Rachel Leong, Soll Chi, Qingyue Guo, Frank Zhang
A Longitudinal, Taxonomical Analysis of the Microbiome and Spatial Mapping of the Dynamics of Genera of Interest Reveals Pathogenic Spread Throughout Confined Living Quarters
August 28, 2024
Rachel Leong, Sina Safaeian, Jenny Zhang
Construction of a Plasmid that Expresses an N-terminally 6xHis Tagged Protein Spanning Amino Acids Gly139 to Pro552 of the Passenger Domain of the Escherichia coli Autotransporter Protein Ag43
August 28, 2024
Susan Zhang; Vivian Mo; Rae Xu, Jordan Sanders, Yimin Wang
Parkinson’s Disease Dampens the Impact of Mental Health on Microbial Predicted Metabolic Functions
August 28, 2024
Hansel Anggunmulia, Amy Chen, Irina Chua, Wenny Feng, Kriti Randhawa
The Hawai‘i Space Exploration Analog and Simulation (HI-SEAS) is a Poor Model for Studying International Space Station Microbiome
August 28, 2024
Shutong Gang, Claudia Szlavy
Core microbiomes found in habitats with sandy bottom substratum are the most phylogenetically diverse among trophic level three ray-finned fish midgut samples
September 8, 2023
Soroush Mohebat, Pooya Namavari, Sourena Oveisi, Negarin Shahtalebi
Non-breast milk diet increases gut microbial diversity and inflammation in six-month-old infants
September 8, 2023
Ashleen Kaur Khatra, Jenny Shee, Aidan Wang, Wei Chuan Kevin Wang
Increased pathological severity of Familial Dysautonomia enriches murine gut microbial composition
September 6, 2023
Mari Aiko Job, Carly Pistawka, Zee Muradi, Jiaqi Wu
Increase in gut microbiota taxonomic sensitivity to inflammation from 6 to 12 month infants
September 5, 2023
Ishana Lodhia, Lochlan Breckenridge, Fares Burwag, Renee Lim
High-fish intake is associated with later-onset Parkinson’s disease and enrichment of short-chain fatty acid-producing microorganisms
September 5, 2023
Jinny Choi, Veronika Lewis, Claire Sie, Justin Yap
Dietary fiber consumption is associated with the selection of key microbial species but does not affect overall microbial diversity in a Colombian cohort
September 5, 2023
Leon Lin, Paul Russ Agawin, Jennifer Tong, Simon Rai, Ghazaleh Shoaib
Investigating the chitin-binding capability of recombinant ChiC expressed in E. coli
September 5, 2023
Soroush Mohebat, Zee Muradi, Pooya Namavari, Negarin Shahtalebi
Refolding of Recombinant Chitinase C of Pseudomonas aeruginosa purified from insoluble fractions using IMAC purification
September 5, 2023
Luiza Lopes Pontual, Mark Josef Huang, Parneet Sekhon, Taylor Bootsma
Iron-deficiency anemia is associated with loss of gut microbial diversity in 6- and 12-month-old infants
September 5, 2023
Ali Reza Nasseri, Darius Parmar, Mehdi Tabesh, Junqin Wang
Individuals with abnormal cardiometabolic statuses are more vulnerable to smoking-induced alterations of the gut microbiome in a Colombian population undergoing Westernization
September 5, 2023
Haein Kim, Davey Li , Apsara Srinivas, Leonardo Wu
Optimization of expression in Escherichia coli BL21 (DE3), IMAC purification, storage, and preliminary functional characterization of recombinant Chitinase C from Pseudomonas aeruginosa
September 5, 2023
Grace Bodykevich, Adriana Ibtisam, Lanyin Mao
The gut microbiome belonging to Colombian adults of younger generations has shifted to a more westernized composition compared to older generations
September 5, 2023
Cathryn Guo, Freda Ho, Riley Tieu, Janet Wu
Purification of Chitinase C in transformed E. coli BL21 (DE3) preserves a functional Chitin-binding Domain
September 5, 2023
Paula Renee Boldut, Sana Samedi, Rebecca Saunders, Lanyin Mao
Towards the construction of a chitin-binding domain BioBrick®: PCR Amplification of the Pseudomonas aeruginosa chiC chitin-binding domain
September 5, 2023