Vol. 10 (2024): Undergraduate Journal of Experimental Microbiology and Immunology (UJEMI+)

DOI: https://doi.org/10.14288/ujemi.v10i

Published: 2024-09-02

Research Article

Chaperone Protein BamB Directly Supports BrkA Translocation and Folding in Escherichia coli

Fares Burwag, Jamie Corbett, Imogen Porter, Kaila Villarey
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Escherichia coli Secretion of a Variant in the Bordetella pertussis Autotransporter Protein BrkA Containing a Dual Polyhistidine-Tagged 112 Amino Acid Insert Between Asp-57 And Ala-58 of its Passenger Domain

Hayley Emery, Nicole Cormack, Maya Ruehlen, Aiden Simard
- PDF
Harnessing the BrkA Autotransporter to Surface Display the Zinc-Binding Domain Tetrahymena thermophila Metallothionein MTT5 on Escherichia coli for Zinc Biosorption Evaluation

David Lin, Tiffany Lok Ting Wai, Alice Wang, Kevin Zhang
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The DsbA Chaperone Protein May Be Necessary for Outer Membrane Secretion of BrkA

Rob WG Cloke, Dima Lim, Luiza Lopes Pontual, Max Yang
- PDF
Engineering Bordetella pertussis BrkA Autotransporter for Chitin-Binding Domain Surface Expression: Exploring its Potential for Whole-Cell Immobilization

Alisa Li, Tiffany Wu, Karen Yeung, Alicia Zhang
- PDF
Promoter Mapping Analysis Using a GFP Reporter Plasmid Suggests that the lac Promoter May Drive brka Expression on Plasmid pDO6935 in Escherichia coli

Nidhin Biju, Sharisse Chan, Betty Hong, Renz Po
- PDF
Mapping the brkA Promoter Region on pDO6935 in Escherichia coli Using pLISA, A Novel Promoterless GFP Reporter Plasmid

Emilie Haniak, Annie Tsoromocos, Hari Arneja
- PDF
Purified Ag43α Protein as a Potential Method for Preventing Escherichia coli Autoaggregation

Samantha K Allum, Si An Chen, Sean Dang, Pranjali Singh
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Chaperone DegP Is Not Necessary for the Polyhistidine Tag-Detected Secretion of Autotransporter BrkA in Escherichia coli BW25113

Loujain Bilal, Ayesha Lalani, Màiri MacAulay, Parvin Malhi
- PDF
The lac Promoter May Not Regulate brkA Expression in Plasmid pDO6935 in Escherichia coli

Alec Jessen, Melissa `Anne Lagace, Erica Won, Wren Lee
- PDF
The Distance of the lac Regulatory Region to the Translation Start Codon of gfp on Plasmid pEAH23A Does not Change GFP Expression Levels

Trushaan Bundhoo, Adam Abdirahman Hassan, Brandon Wong, Rochelle Guan
- PDF
Mapping Potential Transcription Start Sites of the brka Gene on pDO6935 in Escherichia coli Using the ARF-TSS Method

Gurpreet Sidhu, Sana Alayoubi, Alissa Gama, Jamila Huseynova
- PDF
RNA-seq Analysis of Plasmodium falciparum Shows Upregulated Genes Involved in Merozoite Egress and Erythrocyte Invasion

Ethan Clements, Gabriella Pflederer, Lena Shehayber
- PDF
Exploring the Effects of Isotretinoin on the Oral Microbiome: A Comparative Study of Microbial Diversity and Composition

William Humphrey
- PDF
Sex Influences Gut Microbial Composition in Mice with Familial Dysautonomia but is not the Primary Determinant of Microbial Functional Diversity

May Jang, Olivia Kwon, Alisa Li, Zhuohui Lin, Karen Yeung
- PDF
Dopaminergic Therapeutics for Treating Parkinson’s Disease Were Associated with a Shift in the Gut Microbiota to Resemble Healthy Individuals

Ali Zaidi, John Goh, David Tan, Cayden Yu, Alicia Zhang
- PDF
Eczema May Be Masking the Effects of Multiple Sclerosis on the Gut Microbiome

Clare Konnert, Kaitlin Law, Michelle Tong, Anny Xia, Davey Li
- PDF
The Diet of the Hadza Tribe is Higher in Gut Microbial Diversity, but Lower in Functional Diversity when Compared to a Westernized Diet

Adam Hassan, Farbod Nematifar, Timothy Bernas, Trushaan Bundhoo, Young Ha Jin
- PDF
Nutrients May Play a Complex Role in Influencing Microbiota Composition and Function in Parkinson’s Disease Patients

Rob Cloke, Louise He, Gregory Nikas, Adam Voss, Kevin Zhang
- PDF
Bacterial Composition and Metabolic Pathways Differ in Six-Month-Old Infants from Peru and California, USA

Stella Lin, Kevin Le, Risa Fox, Michael Qiu, Dennis Xie
- PDF
Ironing Out Anemia: High Inflammation Modulates Microbial Composition and Indicates the Activation of Cellular Stress Responses in Infected Anemic Infants

Ashnoor Arora, Ziniu Chen, Kshemaka Gunawardena, Jayden Liu, Jenny Zhang
- PDF
Smoking in the Context of Westernized Diets is Associated with a More Volatile Microbiome and Predicted Gut Function

Samantha Allum, Sean Dang, Imogen Porter, Tiffany Lok Ting Wai, Alice Wang
- PDF
Parkinson’s Disease Status but not High Sodium Consumption is Correlated with Alterations in the Gut Microbiome

Jamila Huseynova, Sana Alayoubi, Ives Chau, Alissa Gama, Ethan Wong
- PDF
Low Serum Saturated Fatty Acid Levels Positively Associate with Microbiota Diversity and Metabolic Pathways in Parkinson's Disease Patients

Ali Tavakoli Hedayatpour, Parsa Khatami, Jordan Si, David Lin, Josh Zhang
- PDF
Individuals in Shared Dormitories who Rarely Wash their Sheets are Associated with Greater Sex-Specific Microbial Changes Compared to Individuals who Wash their Sheets Frequently

Lina Anwari, Abigail Cho, Betty Hong, Màiri MacAulay, Juliet Malkowski
- PDF
Dogs Are a Poor Taxonomic Model for Human Inflammatory Bowel Disease, but Are Potentially Functionally Relevant for Human Ulcerative Colitis

Brian Deng, Sharisse Chan, Renz Po, Nicholas Viegas, Max Yang
- PDF
Soil Microbiome Beta, Taxonomic and Functional Diversity in British Columbian Logged Douglas-Fir Stands Differs Across the A and O Horizon

Ally Howard, Jastina Aujla, Anu Chauhan, Fatima Nadeem, Vera Pu
- PDF
Surgical Intervention Correlates with Reduced Bacterial Diversity in the Gut Microbiome of Crohn's Disease Patients Exhibiting Low Levels of Inflammation

Max `Bremner, Andrew Feng, James Forward, Rochelle Guan, Sarah Zhang
- PDF

Review Article

Regulators, Processes, and Intricacies of the Innate Immune System with a Focus on the NEMO Complex

Arjun Yedavalli
- PDF
High Maternal Cortisol Levels During Pregnancy Leads to Dysbiosis in Newborn’s Gut Microbiome

Morgan Neal
- PDF

Vol. 10 (2024): Undergraduate Journal of Experimental Microbiology and Immunology (UJEMI+)

Research Article

Chaperone Protein BamB Directly Supports BrkA Translocation and Folding in Escherichia coli

Escherichia coli Secretion of a Variant in the Bordetella pertussis Autotransporter Protein BrkA Containing a Dual Polyhistidine-Tagged 112 Amino Acid Insert Between Asp-57 And Ala-58 of its Passenger Domain

Harnessing the BrkA Autotransporter to Surface Display the Zinc-Binding Domain Tetrahymena thermophila Metallothionein MTT5 on Escherichia coli for Zinc Biosorption Evaluation

The DsbA Chaperone Protein May Be Necessary for Outer Membrane Secretion of BrkA

Engineering Bordetella pertussis BrkA Autotransporter for Chitin-Binding Domain Surface Expression: Exploring its Potential for Whole-Cell Immobilization

Promoter Mapping Analysis Using a GFP Reporter Plasmid Suggests that the lac Promoter May Drive brka Expression on Plasmid pDO6935 in Escherichia coli

Mapping the brkA Promoter Region on pDO6935 in Escherichia coli Using pLISA, A Novel Promoterless GFP Reporter Plasmid

Purified Ag43α Protein as a Potential Method for Preventing Escherichia coli Autoaggregation

Chaperone DegP Is Not Necessary for the Polyhistidine Tag-Detected Secretion of Autotransporter BrkA in Escherichia coli BW25113

The lac Promoter May Not Regulate brkA Expression in Plasmid pDO6935 in Escherichia coli

The Distance of the lac Regulatory Region to the Translation Start Codon of gfp on Plasmid pEAH23A Does not Change GFP Expression Levels

Mapping Potential Transcription Start Sites of the brka Gene on pDO6935 in Escherichia coli Using the ARF-TSS Method

RNA-seq Analysis of Plasmodium falciparum Shows Upregulated Genes Involved in Merozoite Egress and Erythrocyte Invasion

Exploring the Effects of Isotretinoin on the Oral Microbiome: A Comparative Study of Microbial Diversity and Composition

Sex Influences Gut Microbial Composition in Mice with Familial Dysautonomia but is not the Primary Determinant of Microbial Functional Diversity

Dopaminergic Therapeutics for Treating Parkinson’s Disease Were Associated with a Shift in the Gut Microbiota to Resemble Healthy Individuals

Eczema May Be Masking the Effects of Multiple Sclerosis on the Gut Microbiome

The Diet of the Hadza Tribe is Higher in Gut Microbial Diversity, but Lower in Functional Diversity when Compared to a Westernized Diet

Nutrients May Play a Complex Role in Influencing Microbiota Composition and Function in Parkinson’s Disease Patients

Bacterial Composition and Metabolic Pathways Differ in Six-Month-Old Infants from Peru and California, USA

Ironing Out Anemia: High Inflammation Modulates Microbial Composition and Indicates the Activation of Cellular Stress Responses in Infected Anemic Infants

Smoking in the Context of Westernized Diets is Associated with a More Volatile Microbiome and Predicted Gut Function

Parkinson’s Disease Status but not High Sodium Consumption is Correlated with Alterations in the Gut Microbiome

Low Serum Saturated Fatty Acid Levels Positively Associate with Microbiota Diversity and Metabolic Pathways in Parkinson's Disease Patients

Individuals in Shared Dormitories who Rarely Wash their Sheets are Associated with Greater Sex-Specific Microbial Changes Compared to Individuals who Wash their Sheets Frequently

Dogs Are a Poor Taxonomic Model for Human Inflammatory Bowel Disease, but Are Potentially Functionally Relevant for Human Ulcerative Colitis

Soil Microbiome Beta, Taxonomic and Functional Diversity in British Columbian Logged Douglas-Fir Stands Differs Across the A and O Horizon

Surgical Intervention Correlates with Reduced Bacterial Diversity in the Gut Microbiome of Crohn's Disease Patients Exhibiting Low Levels of Inflammation

Review Article

Regulators, Processes, and Intricacies of the Innate Immune System with a Focus on the NEMO Complex

High Maternal Cortisol Levels During Pregnancy Leads to Dysbiosis in Newborn’s Gut Microbiome

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